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    Gm5578 predicted pseudogene 5578 [ Mus musculus (house mouse) ]

    Gene ID: 434077, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm5578provided by MGI
    Official Full Name
    predicted pseudogene 5578provided by MGI
    Primary source
    MGI:MGI:3645010
    See related
    AllianceGenome:MGI:3645010
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG434077
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    Genomic context

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    See Gm5578 in Genome Data Viewer
    Location:
    6 E3; 6 52.4 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (112582366..112585758)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (112605405..112608797)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene ADP-ribosylation factor GTPase activating protein 2 pseudogene Neighboring gene predicted gene, 23002 Neighboring gene RAD18 E3 ubiquitin protein ligase Neighboring gene STARR-seq mESC enhancer starr_17018 Neighboring gene STARR-seq mESC enhancer starr_17019 Neighboring gene STARR-seq mESC enhancer starr_17020 Neighboring gene STARR-positive B cell enhancer ABC_E8831 Neighboring gene predicted gene, 35824

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette. Taniwaki T, et al. Dev Growth Differ, 2005 Apr. PMID 15840001
    2. Exchangeable gene trap using the Cre/mutated lox system. Araki K, et al. Cell Mol Biol (Noisy-le-grand), 1999 Jul. PMID 10512203
    3. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Other Names

    • BRO1 domain and CAAX motif containing pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_031821.3 

      Range
      101..3493
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      112582366..112585758
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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