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    ATP5F1CP1 ATP synthase F1 subunit gamma pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 645560, updated on 17-Sep-2024

    Summary

    Official Symbol
    ATP5F1CP1provided by HGNC
    Official Full Name
    ATP synthase F1 subunit gamma pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:834
    See related
    Ensembl:ENSG00000224004 AllianceGenome:HGNC:834
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ATP5C2; ATP5CL2; ATP5C1P1
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    Genomic context

    See ATP5F1CP1 in Genome Data Viewer
    Location:
    14q22.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (53990931..53992023, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (48199135..48200227, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (54457649..54458741, complement)

    Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene BMP4 promoter region Neighboring gene uncharacterized LOC124903317 Neighboring gene microRNA 5580 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr14:54449077-54449856 Neighboring gene bone morphogenetic protein 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8409 Neighboring gene uncharacterized LOC105370507 Neighboring gene NANOG hESC enhancer GRCh37_chr14:54551221-54551722 Neighboring gene uncharacterized LOC105370505 Neighboring gene Sharpr-MPRA regulatory region 2316 Neighboring gene HNF4 motif-containing MPRA enhancer 145 Neighboring gene Sharpr-MPRA regulatory region 14732 Neighboring gene VISTA enhancer hs1414 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr14:54718298-54719497 Neighboring gene NANOG hESC enhancer GRCh37_chr14:54806435-54806956 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr14:54828631-54829198 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr14:54829199-54829766 Neighboring gene H3K27ac hESC enhancer GRCh37_chr14:54836737-54837238 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:54860347-54860846 Neighboring gene cyclin dependent kinase inhibitor 3

    Genomic regions, transcripts, and products

    Phenotypes

    EBI GWAS Catalog

    Description
    Genome-wide association scan of dental caries in the permanent dentition.
    EBI GWAS Catalog

    Pathways from PubChem

    General gene information

    Other Names

    • ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 pseudogene 1
    • ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 2
    • ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide-like 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_004656.3 

      Range
      101..1193
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

      Range
      53990931..53992023 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060938.1 Alternate T2T-CHM13v2.0

      Range
      48199135..48200227 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)