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    M6pr-ps1 mannose-6-phosphate receptor, cation dependent, pseudogene 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 120099209, updated on 9-Dec-2024

    Summary

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    Official Symbol
    M6pr-ps1provided by RGD
    Official Full Name
    mannose-6-phosphate receptor, cation dependent, pseudogene 1provided by RGD
    Primary source
    RGD:41276463
    See related
    AllianceGenome:RGD:41276463
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable protein domain specific binding activity. Predicted to be involved in protein targeting to lysosome. Predicted to be located in Golgi apparatus; endosome; and membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See M6pr-ps1 in Genome Data Viewer
    Location:
    Xq31
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (86333634..86335869)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (82129168..82131403)

    Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene CPX chromosome region, candidate 1 Neighboring gene SNF related kinase, pseudogene 2 Neighboring gene vitamin K epoxide reductase complex, subunit 1-like 1, pseudogene 1 Neighboring gene H2A.B variant histone 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • cation-dependent mannose-6-phosphate receptor-like

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables protein domain specific binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein targeting to lysosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in protein targeting to lysosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in trans-Golgi network IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_074635.1 

      Range
      101..2336
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086039.1 Reference GRCr8

      Range
      86333634..86335869
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version