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    Son-ps1 SON DNA and RNA binding protein, pseudogene 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 103692307, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Son-ps1provided by RGD
    Official Full Name
    SON DNA and RNA binding protein, pseudogene 1provided by RGD
    Primary source
    RGD:9196141
    See related
    AllianceGenome:RGD:9196141
    Gene type
    pseudo
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Thymus (RPKM 614.9), Lung (RPKM 608.8) and 9 other tissues See more
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    Genomic context

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    See Son-ps1 in Genome Data Viewer
    Location:
    5q12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (23266971..23271013, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (18469476..18473456, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (18442950..18446389, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 652-like Neighboring gene uncharacterized LOC134478923 Neighboring gene uncharacterized LOC108350924 Neighboring gene peptidylprolyl isomerase D, pseudogene 3 Neighboring gene uncharacterized LOC134478924

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • protein SON-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      23266971..23271013 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials