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    LOC642677 stabilizer of axonemal microtubules 2 pseudogene [ Homo sapiens (human) ]

    Gene ID: 642677, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC642677
    Gene description
    stabilizer of axonemal microtubules 2 pseudogene
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LOC642677 in Genome Data Viewer
    Location:
    15q25.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (84052995..84054057, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (81918946..81920008, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (84721747..84722809, complement)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene ADAMTS like 3 Neighboring gene RNA, U6 small nuclear 1339, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9975 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9976 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9977 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9978 Neighboring gene uncharacterized LOC105370935 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6764 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9980 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9979 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_41714 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_41724 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr15:84710870-84712069 Neighboring gene elongation factor like GTPase 1 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6765 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:84821487-84821987 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:84824261-84824867 Neighboring gene dynamin 1 pseudogene 41

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • family with sequence similarity 154, member B pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_022115.3 

      Range
      101..1163
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      84052995..84054057 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791797.1 Reference GRCh38.p14 PATCHES

      Range
      658789..659851 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      81918946..81920008 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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