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    LOC643015 nucleolar protein 11 pseudogene [ Homo sapiens (human) ]

    Gene ID: 643015, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC643015
    Gene description
    nucleolar protein 11 pseudogene
    See related
    Ensembl:ENSG00000183171
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LOC643015 in Genome Data Viewer
    Location:
    Xq28
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (150114366..150116821)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (148381982..148384437)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (149282597..149285052)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21046 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21047 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21048 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21049 Neighboring gene EOLA2 divergent transcript Neighboring gene endothelium and lymphocyte associated ASCH domain 2 Neighboring gene heat shock transcription factor family, X-linked member 4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:149289377-149289876 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:149385283-149385784 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:149385785-149386284 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chrX:149387913-149388449 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chrX:149393501-149394088 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chrX:149394089-149394674 Neighboring gene microRNA 2114 Neighboring gene X-ray repair cross complementing 6 pseudogene 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_022712.2 

      Range
      101..2556
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      150114366..150116821
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      148381982..148384437
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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