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    LOC100652871 glutathione S-transferase theta-4-like [ Homo sapiens (human) ]

    Gene ID: 100652871, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC100652871
    Gene description
    glutathione S-transferase theta-4-like
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LOC100652871 in Genome Data Viewer
    Location:
    22q11.23
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (23940000..23942798)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (24282187..24284985)

    Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr22:24236245-24237052 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:24237053-24237860 Neighboring gene MIF antisense RNA 1 Neighboring gene macrophage migration inhibitory factor Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:24249031-24249876 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:24250723-24251567 Neighboring gene KLHL5 pseudogene 1 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr22:24293845-24294536 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:24294537-24295228 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:24297463-24298070 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr22:24298071-24298678 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr22:24298679-24299286 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:24301603-24302268 Neighboring gene glutathione S-transferase theta 2B Neighboring gene D-dopachrome tautomerase like Neighboring gene D-dopachrome tautomerase

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_171772.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AP000350

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

      Range
      23940000..23942798
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187633.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      176362..179160
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)