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    LOC388996 otopetrin 1 pseudogene [ Homo sapiens (human) ]

    Gene ID: 388996, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC388996
    Gene description
    otopetrin 1 pseudogene
    See related
    Ensembl:ENSG00000278131
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See LOC388996 in Genome Data Viewer
    Location:
    2p11.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (91589429..91621501)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (91779194..91811217)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (91777471..91809527)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101927984 Neighboring gene MAPK-interacting and spindle-stabilizing protein-like Neighboring gene OCT4 hESC enhancer GRCh37_chr2:91744009-91744510 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:91762682-91763600 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:91763601-91764518 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:91782891-91783056 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:91800405-91800908 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:91814909-91815410 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:91815411-91815910 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:91815988-91816557 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:91820030-91820530 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:91820531-91821031 Neighboring gene LSP1 pseudogene 4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:91846385-91847216 Neighboring gene RNA, 5S ribosomal pseudogene 100

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_021568.4 

      Range
      101..32173
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      91589429..91621501
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      91779194..91811217
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)