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    ST6GALNAC2P1 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100422716, updated on 17-Sep-2024

    Summary

    Official Symbol
    ST6GALNAC2P1provided by HGNC
    Official Full Name
    ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:45160
    See related
    Ensembl:ENSG00000228902 AllianceGenome:HGNC:45160
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See ST6GALNAC2P1 in Genome Data Viewer
    Location:
    2p11.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (84039912..84040763, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (84041011..84041862, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (84267036..84267887, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 1312, pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chr2:83971862-83972406 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:84016050-84016614 Neighboring gene NANOG hESC enhancer GRCh37_chr2:84091690-84092191 Neighboring gene NANOG hESC enhancer GRCh37_chr2:84180705-84181249 Neighboring gene CRISPRi-validated cis-regulatory element chr2.2992 Neighboring gene CRLF3 pseudogene 3 Neighboring gene uncharacterized LOC107985905 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:84445877-84446376 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:84517185-84518384 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:84524005-84525204 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16098 Neighboring gene FUN14 domain containing 2 pseudogene 2 Neighboring gene succinate-CoA ligase GDP/ADP-forming subunit alpha

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Other Names

    • ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 pseudogene 1
    • ST6 GalNAc alpha-2,6-sialyltransferase 2 pseudogene 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_023578.1 

      Range
      101..952
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      84039912..84040763 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      84041011..84041862 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)