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    SYNCRIPP1 SYNCRIP pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 149844, updated on 28-Oct-2024

    Summary

    Official Symbol
    SYNCRIPP1provided by HGNC
    Official Full Name
    SYNCRIP pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:56945
    See related
    Ensembl:ENSG00000234241 AllianceGenome:HGNC:56945
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See SYNCRIPP1 in Genome Data Viewer
    Location:
    20p12.3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (6213597..6215339)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (6254824..6256566)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (6194244..6195986)

    Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene FERM domain containing kindlin 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12663 Neighboring gene TARDBP pseudogene 1 Neighboring gene fibroblast growth factor receptor 3 pseudogene 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:6301432-6302266 Neighboring gene MPRA-validated peak4138 silencer Neighboring gene uncharacterized LOC124904866

    Genomic regions, transcripts, and products

    Phenotypes

    EBI GWAS Catalog

    Description
    Genome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_002370.6 

      Range
      101..1843
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

      Range
      6213597..6215339
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060944.1 Alternate T2T-CHM13v2.0

      Range
      6254824..6256566
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)