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oppB oligopeptide ABC transporter permease OppB [ Yersinia similis ]

Gene ID: 96665599, updated on 3-Dec-2024

Summary

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Gene symbol
oppB
Gene description
oligopeptide ABC transporter permease OppB
Locus tag
BF17_RS18620
Gene type
protein coding
Organism
Yersinia similis (strain: Y_sim_228, nat-host: rabbit, culture-collection: DSM:18211, type-material: type strain of Yersinia similis)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia
Old locus tag
BF17_19590
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Genomic context

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NZ_CP007230.1Genomic Context describing neighboring genes Neighboring gene YchE family NAAT transporter Neighboring gene oligopeptide ABC transporter substrate-binding protein OppA Neighboring gene oligopeptide ABC transporter permease OppC Neighboring gene ABC transporter ATP-binding protein Neighboring gene murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP007230.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Between computational predictions and high-throughput transcriptional profiling: in depth expression analysis of the OppB trans-membrane subunit of Escherichia coli OppABCDF oligopeptide transporter. Masulis IS, et al. Res Microbiol, 2020 Mar. PMID 31704256
  2. Genome Sequence of Yersinia similis Y228T, a Member of the Yersinia pseudotuberculosis Complex. Sprague LD, et al. Genome Announc, 2014 Mar 27. PMID 24675860, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
oligopeptide ABC transporter permease OppB
WP_002210654.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP007230.1 Reference assembly

    Range
    4076754..4077674
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_002210654.1 MULTISPECIES: oligopeptide ABC transporter permease OppB [Yersinia pseudotuberculosis complex]

    See identical proteins and their annotated locations for WP_002210654.1

    UniProtKB/TrEMBL
    A0A0E1NU48, A0A0H2W434, A0A0H2YGQ3, A0A0T9Q7D8, A0A0U1QVP4, A0A2U2GX74, A0A384KWG9, A0A9X2XRF4, A0AAP9K4Q2, A0AAV3BG72, A0AAX2I231, Q0WEY2, Q66AM4, Q74TY4, Q7CIN3
Nucleotide Protein
Heading Accession and Version