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BF17_RS05325 Hcp family type VI secretion system effector [ Yersinia similis ]

Gene ID: 96663131, updated on 3-Dec-2024

Summary

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Gene symbol
BF17_RS05325
Gene description
Hcp family type VI secretion system effector
Locus tag
BF17_RS05325
Gene type
protein coding
Organism
Yersinia similis (strain: Y_sim_228, nat-host: rabbit, culture-collection: DSM:18211, type-material: type strain of Yersinia similis)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia
Old locus tag
BF17_05880
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Genomic context

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NZ_CP007230.1Genomic Context describing neighboring genes Neighboring gene type VI secretion system contractile sheath large subunit Neighboring gene type VI secretion system contractile sheath small subunit Neighboring gene maltose operon protein MalM Neighboring gene maltoporin

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP007230.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Breadth and Molecular Basis of Hcp-Driven Type VI Secretion System Effector Delivery. Howard SA, et al. mBio, 2021 Jun 29. PMID 34061601, Free PMC Article
  2. Genome Sequence of Yersinia similis Y228T, a Member of the Yersinia pseudotuberculosis Complex. Sprague LD, et al. Genome Announc, 2014 Mar 27. PMID 24675860, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
Hcp family type VI secretion system effector

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP007230.1 Reference assembly

    Range
    1203141..1203659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_002212097.1 MULTISPECIES: Hcp family type VI secretion system effector [Yersinia pseudotuberculosis complex]

    See identical proteins and their annotated locations for WP_002212097.1

    UniProtKB/TrEMBL
    A0A0E1NUY2, A0A0H2W8A5, A0A0H2YD57, A0A0H3AZD7, A0A0T9JM72, A0A0T9R5Q6, A0A0U1QXJ9, A0A5P8YK90, A0A9X3BKQ3, A0AAP9G3Y1, A0AAV3BAX7, A0AAX2HWA6, Q0WAU9, Q74RG6, Q7CLD4
Nucleotide Protein
Heading Accession and Version