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LOC9655834 40S ribosomal protein S30 [ Selaginella moellendorffii ]

Gene ID: 9655834, updated on 22-Oct-2023

Summary

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Gene symbol
LOC9655834
Gene description
40S ribosomal protein S30
Locus tag
SELMODRAFT_227173
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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Genomic context

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See LOC9655834 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314261.1 (3347029..3347510, complement)

NW_003314261.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112347149 Neighboring gene uncharacterized LOC9655833 Neighboring gene BTB/POZ domain-containing protein 7 Neighboring gene pentatricopeptide repeat-containing protein At5g16860-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003314261 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314261.1 Reference v1.0

    Range
    3347029..3347510 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002960933.2 → XP_002960979.1  40S ribosomal protein S30

    See identical proteins and their annotated locations for XP_002960979.1

    UniProtKB/TrEMBL
    D8QQW0, D8R9Q4
    Conserved Domains (1) summary
    pfam04758
    Location:3 → 59
    Ribosomal_S30; Ribosomal protein S30
Nucleotide Protein
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