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LOC9652692 ribosomal RNA small subunit methyltransferase B [ Selaginella moellendorffii ]

Gene ID: 9652692, updated on 22-Oct-2023

Summary

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Gene symbol
LOC9652692
Gene description
ribosomal RNA small subunit methyltransferase B
Locus tag
SELMODRAFT_227613
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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Genomic context

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See LOC9652692 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314268.1 (191898..193864, complement)

NW_003314268.1Genomic Context describing neighboring genes Neighboring gene probable ubiquitin-conjugating enzyme E2 33 Neighboring gene ribosomal RNA small subunit methyltransferase NEP1 Neighboring gene nucleolin Neighboring gene uncharacterized LOC112345130 Neighboring gene endoribonuclease Dicer homolog 4-like Neighboring gene endoribonuclease Dicer homolog 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003314268 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC9652692

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314268.1 Reference v1.0

    Range
    191898..193864 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024671252.1 → XP_024527020.1  uncharacterized protein LOC9652692

    UniProtKB/TrEMBL
    D8R5H2

  2. XM_002966412.2 → XP_002966458.1  uncharacterized protein LOC9652692

    See identical proteins and their annotated locations for XP_002966458.1

    UniProtKB/TrEMBL
    D8R5H2
    Conserved Domains (1) summary
    cl25484
    Location:53 → 416
    Methyltr_RsmF_N; N-terminal domain of 16S rRNA methyltransferase RsmF
Nucleotide Protein
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