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LOC9635752 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic [ Selaginella moellendorffii ]

Gene ID: 9635752, updated on 22-Oct-2023

Summary

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Gene symbol
LOC9635752
Gene description
protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic
Locus tag
SELMODRAFT_169002
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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Genomic context

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See LOC9635752 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314269.1 (2692919..2694183)

NW_003314269.1Genomic Context describing neighboring genes Neighboring gene protein APEM9-like Neighboring gene 9-cis-epoxycarotenoid dioxygenase NCED4, chloroplastic Neighboring gene hsp70 nucleotide exchange factor FES1 Neighboring gene pentatricopeptide repeat-containing protein At4g13650 Neighboring gene malate synthase, glyoxysomal

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003314269 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314269.1 Reference v1.0

    Range
    2692919..2694183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002967030.2 → XP_002967076.1  protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic

    See identical proteins and their annotated locations for XP_002967076.1

    UniProtKB/TrEMBL
    D8QQK4, D8R8C6
    Conserved Domains (2) summary
    PLN03100
    Location:43 → 332
    PLN03100; Permease subunit of ER-derived-lipid transporter; Provisional
    pfam02405
    Location:118 → 327
    MlaE; Permease MlaE
Nucleotide Protein
Heading Accession and Version

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