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VOLCADRAFT_72591 uncharacterized protein [ Volvox carteri f. nagariensis ]

Gene ID: 9621378, updated on 10-Jan-2024

Summary

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Gene symbol
VOLCADRAFT_72591
Gene description
uncharacterized protein
Locus tag
VOLCADRAFT_72591
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Volvox carteri f. nagariensis (strain: Eve, forma: nagariensis)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Volvocaceae; Volvox
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Genomic context

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See VOLCADRAFT_72591 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
7

NW_003307545.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003307545.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri. Prochnik SE, et al. Science, 2010 Jul 9. PMID 20616280, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_002945947.1
  • predicted protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003307545.1 Reference assembly

    Range
    5414884..5418891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002945901.1 → XP_002945947.1  uncharacterized protein VOLCADRAFT_72591 [Volvox carteri f. nagariensis]

    See identical proteins and their annotated locations for XP_002945947.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8TIT2
    Conserved Domains (2) summary
    PLN03100
    Location:53 → 339
    PLN03100; Permease subunit of ER-derived-lipid transporter; Provisional
    pfam02405
    Location:125 → 335
    MlaE; Permease MlaE
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials