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SCHCODRAFT_02646148 uncharacterized protein [ Schizophyllum commune H4-8 ]

Gene ID: 9588209, updated on 17-May-2024

Summary

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Gene symbol
SCHCODRAFT_02646148
Gene description
uncharacterized protein
Locus tag
SCHCODRAFT_02646148
See related
FungiDB:SCHCODRAFT_02646148; VEuPathDB:SCHCODRAFT_02646148
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizophyllum commune H4-8 (strain: H4-8)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Schizophyllaceae; Schizophyllum
Old locus tag
SCHCODRAFT_71518
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Genomic context

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See SCHCODRAFT_02646148 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
8

NW_026089560.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene DUF1900-domain-containing protein Neighboring gene kinesin-like protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026089560.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Transcription Factor Roc1 Is a Key Regulator of Cellulose Degradation in the Wood-Decaying Mushroom Schizophyllum commune. Marian IM, et al. mBio, 2022 Jun 28. PMID 35604096, Free PMC Article
  2. Genome sequence of the model mushroom Schizophyllum commune. Ohm RA, et al. Nat Biotechnol, 2010 Sep. PMID 20622885
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_026089560.1 Reference assembly

    Range
    15551..17065
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003025842.2 → XP_003025888.1  uncharacterized protein SCHCODRAFT_02646148 [Schizophyllum commune H4-8]

    See identical proteins and their annotated locations for XP_003025888.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8QME1
    Conserved Domains (2) summary
    PLN02864
    Location:3 → 270
    PLN02864; enoyl-CoA hydratase
    cd03448
    Location:177 → 304
    HDE_HSD; HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials