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HMPREF9431_RS03555 sigma-54 interaction domain-containing protein [ Segatella oulorum F0390 ]

Gene ID: 95425449, updated on 9-Jan-2025

Summary

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Gene symbol
HMPREF9431_RS03555
Gene description
sigma-54 interaction domain-containing protein
Locus tag
HMPREF9431_RS03555
Gene type
protein coding
Organism
Segatella oulorum F0390 (strain: F0390, nat-host: Homo sapiens)
Lineage
Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Segatella
Old locus tag
HMPREF9431_00744
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Genomic context

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NZ_JH114215.1Genomic Context describing neighboring genes Neighboring gene DUF4837 family protein Neighboring gene 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN Neighboring gene PdxA family protein Neighboring gene lysylphosphatidylglycerol synthase transmembrane domain-containing protein Neighboring gene LptE family protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_JH114215.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sigma 54 bacterial enhancer-binding protein family: mechanism of action and phylogenetic relationship of their functional domains. Morett E, et al. J Bacteriol, 1993 Oct. PMID 8407777, Free PMC Article
  2. Domain architectures of sigma54-dependent transcriptional activators. Studholme DJ, et al. J Bacteriol, 2003 Mar. PMID 12618438, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
sigma-54 interaction domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_JH114215.1 Reference assembly

    Range
    841222..842484
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_004379745.1 sigma-54 interaction domain-containing protein [Segatella oulorum]

    See identical proteins and their annotated locations for WP_004379745.1

    UniProtKB/TrEMBL
    A0A1T4L0C5, G1WA99
Nucleotide Protein
Heading Accession and Version