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def peptide deformylase [ Chromohalobacter israelensis DSM 3043 ]

Gene ID: 95335562, updated on 15-Oct-2024

Summary

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Gene symbol
def
Gene description
peptide deformylase
Locus tag
CSAL_RS14510
Gene type
protein coding
Organism
Chromohalobacter israelensis DSM 3043 (strain: DSM 3043, type-material: type strain of Chromohalobacter salexigens)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter
Old locus tag
Csal_2867
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Genomic context

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Sequence:
NC_007963.1 (3198658..3199170)

NC_007963.1Genomic Context describing neighboring genes Neighboring gene DNA-processing protein DprA Neighboring gene hypothetical protein Neighboring gene methionyl-tRNA formyltransferase Neighboring gene 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007963.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure-function relationships within the peptide deformylase family. Evidence for a conserved architecture of the active site involving three conserved motifs and a metal ion. Meinnel T, et al. J Mol Biol, 1997 Apr 4. PMID 9126850
  2. Complete genome sequence of the halophilic and highly halotolerant Chromohalobacter salexigens type strain (1H11(T)). Copeland A, et al. Stand Genomic Sci, 2011 Dec 31. PMID 22675587, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
peptide deformylase
WP_011508159.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007963.1 Reference assembly

    Range
    3198658..3199170
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011508159.1 peptide deformylase [Chromohalobacter israelensis]

    See identical proteins and their annotated locations for WP_011508159.1

    UniProtKB/Swiss-Prot
    Q1QTJ5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q1QTJ5.1