U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

yohJ putative 3-hydroxypropanoate export protein YohJ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 949127, updated on 3-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
yohJ
Official Full Name
putative 3-hydroxypropanoate export protein YohJ
Primary source
ECOCYC:EG12023
Locus tag
b2141
See related
ASAP:ABE-0007078
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2134
Summary
YohJ is an inner membrane protein with four predicted transmembrane domains; the C terminus is located in the periplasm . [More information is available at EcoCyc: EG12023].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (2230624..2231022)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative membrane protein YohP Neighboring gene tRNA-dihydrouridine(16) synthase Neighboring gene putative 3-hydroxypropanoate export protein YohK Neighboring gene cytidine/deoxycytidine deaminase Neighboring gene DUF218 domain-containing protein SanA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Identification of LytSR-regulated genes from Staphylococcus aureus. Brunskill EW, et al. J Bacteriol, 1996 Oct. PMID 8824633, Free PMC Article
  2. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
  3. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
  4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
putative 3-hydroxypropanoate export protein YohJ

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2230624..2231022
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416646.1 putative 3-hydroxypropanoate export protein YohJ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416646.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7HZ82
    Conserved Domains (1) summary
    PRK01821
    Location:1 → 132
    PRK01821; hypothetical protein; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.