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yjjU putative patatin-like phospholipase YjjU [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948906, updated on 3-Dec-2024

Summary

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Official Symbol
yjjU
Official Full Name
putative patatin-like phospholipase YjjU
Primary source
ECOCYC:G7951
Locus tag
b4377
See related
ASAP:ABE-0014351
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4369
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Genomic context

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Sequence:
NC_000913.3 (4612411..4613484)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene periplasmic chaperone OsmY Neighboring gene DUF1328 domain-containing protein YtjA Neighboring gene putative metal-dependent hydrolase YjjV Neighboring gene putative glycyl-radical enzyme activating enzyme YjjW Neighboring gene DUF3029 domain-containing protein YjjI Neighboring gene deoxyribose-phosphate aldolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcriptional response of Escherichia coli to recombinant protein insolubility. Smith HE. J Struct Funct Genomics, 2007 Mar. PMID 17992580
  2. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071
  3. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
  4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within DNA damage response IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative patatin-like phospholipase YjjU

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4612411..4613484
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418794.1 putative patatin-like phospholipase YjjU [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418794.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7A6QZA1, A0A8S7EFV0, A0A8S7I3N7
    Conserved Domains (1) summary
    COG4667
    Location:14 → 309
    YjjU; Predicted phospholipase, patatin/cPLA2 family [Lipid transport and metabolism]
Nucleotide Protein
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