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sgcX putative endoglucanase with Zn-dependent exopeptidase domain [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948840, updated on 3-Dec-2024

Summary

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Official Symbol
sgcX
Official Full Name
putative endoglucanase with Zn-dependent exopeptidase domain
Primary source
ECOCYC:EG12557
Locus tag
b4305
See related
ASAP:ABE-0014112
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4295; yjhO
Summary
ypdE, frvX and sgcX are paralogs. [More information is available at EcoGene: EG12557].
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Genomic context

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Sequence:
NC_000913.3 (4530530..4531651, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative nucleoside triphosphatase Neighboring gene putative PTS enzyme IIC component SgcC Neighboring gene putative PTS enzyme IIB component SgcB Neighboring gene pseudo Neighboring gene putative methyltransferase YjhP

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. MEROPS: the peptidase database. Rawlings ND, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381862, Free PMC Article
  2. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables aminopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metalloaminopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative endoglucanase with Zn-dependent exopeptidase domain

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4530530..4531651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418725.4 putative endoglucanase with Zn-dependent exopeptidase domain [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418725.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A192CHF4, A0A1X3JMT5
    Conserved Domains (1) summary
    cd05656
    Location:7 → 351
    M42_Frv; M42 Peptidase, endoglucanases
Nucleotide Protein
Heading Accession and Version

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