U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ecpB putative fimbrial chaperone EcpB [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948806, updated on 3-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
ecpB
Official Full Name
putative fimbrial chaperone EcpB
Primary source
ECOCYC:G6163
Locus tag
b0292
See related
ASAP:ABE-0001007
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0291; matC; yagY
Summary
O18K1H7 matABC genes are required for Mat fimbria formation when cloned in K-12. matA mRNA was detected in K-12, but not matBC mRNA. [More information is available at EcoGene: EG13564]. MatC is associated with the expression of Mat fimbriae in the meningitis-causing Escherichia coli O18K1H7. [More information is available at EcoCyc: G6163].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (309358..310026, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative fimbrial chaperone EcpE Neighboring gene fimbrial adhesin EcpD Neighboring gene putative fimbrial usher protein EcpC Neighboring gene common pilus major subunit Neighboring gene DNA-binding transcriptional dual regulator MatA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Purification, crystallization and preliminary X-ray diffraction analysis of the Escherichia coli common pilus chaperone EcpB. Garnett JA, et al. Acta Crystallogr F Struct Biol Commun, 2015 Jun. PMID 26057794, Free PMC Article
  2. matB, a common fimbrillin gene of Escherichia coli, expressed in a genetically conserved, virulent clonal group. Pouttu R, et al. J Bacteriol, 2001 Aug. PMID 11466275, Free PMC Article
  3. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
  4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Purification, crystallization and preliminary X-ray diffraction analysis of the Escherichia coli common pilus chaperone EcpB has been reported.
    Title: Purification, crystallization and preliminary X-ray diffraction analysis of the Escherichia coli common pilus chaperone EcpB.
Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
putative fimbrial chaperone EcpB

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    309358..310026 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414826.1 putative fimbrial chaperone EcpB [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414826.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2X1PJP1, A0A376MBP4
    Conserved Domains (2) summary
    pfam18649
    Location:150 → 221
    EcpB_C; EcpB C-terminal domain
    cl21716
    Location:5 → 175
    PapD_N; Pili and flagellar-assembly chaperone, PapD N-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.