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yiiS DUF406 domain-containing protein YiiS [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948416, updated on 3-Dec-2024

Summary

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Official Symbol
yiiS
Official Full Name
DUF406 domain-containing protein YiiS
Primary source
ECOCYC:EG11876
Locus tag
b3922
See related
ASAP:ABE-0012813
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3914
Summary
EvgAS regulon. [More information is available at EcoGene: EG11876]. Regulation has been described . [More information is available at EcoCyc: EG11876].
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Genomic context

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Sequence:
NC_000913.3 (4112967..4113266)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF1454 domain-containing protein YiiQ Neighboring gene DUF805 domain-containing protein YiiR Neighboring gene universal stress protein D Neighboring gene flavodoxin/ferredoxin-NADP(+) reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. In vitro identification of Rns-regulated genes. Munson GP, et al. J Bacteriol, 2002 Feb. PMID 11807082, Free PMC Article
  2. New members of the Escherichia coli sigmaE regulon identified by a two-plasmid system. Rezuchova B, et al. FEMS Microbiol Lett, 2003 Aug 8. PMID 12900013
  3. Solution NMR structures of proteins VPA0419 from Vibrio parahaemolyticus and yiiS from Shigella flexneri provide structural coverage for protein domain family PFAM 04175. Singarapu KK, et al. Proteins, 2010 Feb 15. PMID 19927321, Free PMC Article
  4. Escherichia coli gene expression responsive to levels of the response regulator EvgA. Masuda N, et al. J Bacteriol, 2002 Nov. PMID 12399493, Free PMC Article
  5. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
DUF406 domain-containing protein YiiS

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4112967..4113266
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418357.1 DUF406 domain-containing protein YiiS [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418357.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    W1WDM9
    Conserved Domains (1) summary
    PRK09981
    Location:1 → 99
    PRK09981; DUF406 domain-containing protein
Nucleotide Protein
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