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kdgT 2-dehydro-3-deoxy-D-gluconate:H(+) symporter [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948407, updated on 17-Dec-2024

Summary

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Official Symbol
kdgT
Official Full Name
2-dehydro-3-deoxy-D-gluconate:H(+) symporter
Primary source
ECOCYC:EG11869
Locus tag
b3909
See related
ASAP:ABE-0012764
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3902
Summary
KdgT is a probable 2-keto-3-deoxy-D-gluconate (KDG) uptake system. [More information is available at EcoCyc: EG11869].
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Genomic context

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Sequence:
NC_000913.3 (4101690..4102673)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional activator RhaR Neighboring gene rhamnose/lyxose:H(+) symporter Neighboring gene superoxide dismutase (Mn) Neighboring gene 6-hydroxyaminopurine reductase Neighboring gene sensor histidine kinase CpxA Neighboring gene DNA-binding transcriptional dual regulator CpxR

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Construction and expression of hybrid plasmids containing the structural gene of the Escherichia coli K-12 3-deoxy-2-oxo-D-gluconate transport system. Mandrand-Berthelot MA, et al. J Bacteriol, 1984 Nov. PMID 6094479, Free PMC Article
  2. Proton uptake linked to the 3-deoxy-2-oxo-d-gluconate-transport system of Escherichia coli. Lagarde AE, et al. Biochem J, 1977 Jan 15. PMID 15555, Free PMC Article
  3. [A common pathway for hexouronate degradation in Escherichia coli K 12. Induction mechanism of 2-keto-3-deoxy-gluconate metabolizing enzymes]. Pouysségur JM, et al. Eur J Biochem, 1972 Nov 7. PMID 4565407
  4. Genetical analysis of fructose utilization by Escherichia coli. Jones-Mortimer MC, et al. Proc R Soc Lond B Biol Sci, 1974 Sep 17. PMID 4154035
  5. Comparative genomics of the KdgR regulon in Erwinia chrysanthemi 3937 and other gamma-proteobacteria. Rodionov DA, et al. Microbiology (Reading), 2004 Nov. PMID 15528647

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables 2-keto-3-deoxygluconate:proton symporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables 2-keto-3-deoxygluconate:proton symporter activity IEA
Inferred from Electronic Annotation
more info
  
enables symporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in 2-keto-3-deoxygluconate transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in carbohydrate transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within gluconate transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
2-dehydro-3-deoxy-D-gluconate:H(+) symporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4101690..4102673
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418345.2 2-dehydro-3-deoxy-D-gluconate:H(+) symporter [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418345.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B1LMV1
    Conserved Domains (1) summary
    PRK05274
    Location:1 → 321
    PRK05274; 2-keto-3-deoxygluconate permease; Provisional
Nucleotide Protein
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