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rhaM L-rhamnose mutarotase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948402, updated on 17-Dec-2024

Summary

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Official Symbol
rhaM
Official Full Name
L-rhamnose mutarotase
Primary source
ECOCYC:EG11865
Locus tag
b3901
See related
ASAP:ABE-0012729
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3894; yiiL
Summary
Utilizing NMR techniques, RhaM was shown to catalyze the anomeric conversion of rhamnose . [More information is available at EcoCyc: EG11865].
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Genomic context

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Sequence:
NC_000913.3 (4093124..4093438, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene peptidase M42 family protein FrvX Neighboring gene putative PTS enzyme IIBC component FrvB Neighboring gene putative PTS enzyme IIA component FrvA Neighboring gene rhamnulose-1-phosphate aldolase Neighboring gene L-rhamnose isomerase Neighboring gene rhamnulokinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article
  2. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
  3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  4. NMR application probes a novel and ubiquitous family of enzymes that alter monosaccharide configuration. Ryu KS, et al. J Biol Chem, 2004 Jun 11. PMID 15060078
  5. Structural insights into the monosaccharide specificity of Escherichia coli rhamnose mutarotase. Ryu KS, et al. J Mol Biol, 2005 May 27. PMID 15876375

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables L-rhamnose mutarotase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables L-rhamnose mutarotase activity IEA
Inferred from Electronic Annotation
more info
  
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein homodimerization activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables racemase and epimerase activity, acting on carbohydrates and derivatives IBA
Inferred from Biological aspect of Ancestor
more info
  
enables racemase and epimerase activity, acting on carbohydrates and derivatives IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in rhamnose catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within rhamnose catabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in rhamnose metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
L-rhamnose mutarotase
NP_418337.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4093124..4093438 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418337.1 L-rhamnose mutarotase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418337.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376X5Y0
    Conserved Domains (1) summary
    TIGR02625
    Location:3 → 104
    YiiL_rotase; L-rhamnose mutarotase
Nucleotide Protein
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