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yiiG DUF3829 domain-containing lipoprotein YiiG [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948392, updated on 3-Dec-2024

Summary

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Official Symbol
yiiG
Official Full Name
DUF3829 domain-containing lipoprotein YiiG
Primary source
ECOCYC:EG11860
Locus tag
b3896
See related
ASAP:ABE-0012718
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3889
Summary
First 21 aa are a type II signal peptide. [More information is available at EcoGene: EG11860].
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Genomic context

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Sequence:
NC_000913.3 (4087002..4088057)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene formate dehydrogenase O subunit alpha Neighboring gene sulfurtransferase for molybdenum cofactor sulfuration Neighboring gene putative DNA-binding transcriptional regulator FrvR Neighboring gene peptidase M42 family protein FrvX Neighboring gene putative PTS enzyme IIBC component FrvB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article
  2. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
  3. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130
  4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
DUF3829 domain-containing lipoprotein YiiG

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4087002..4088057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418332.1 DUF3829 domain-containing lipoprotein YiiG [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418332.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8T5YDL9
    Conserved Domains (1) summary
    pfam12889
    Location:72 → 349
    DUF3829; Protein of unknown function (DUF3829)
Nucleotide Protein
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