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yiaV putative membrane fusion protein YiaV [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948106, updated on 3-Dec-2024

Summary

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Official Symbol
yiaV
Official Full Name
putative membrane fusion protein YiaV
Primary source
ECOCYC:EG12290
Locus tag
b3586
See related
ASAP:ABE-0011712
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3575
Summary
YiaV is an inner membrane protein with two predicted transmembrane domains. [More information is available at EcoCyc: EG12290].
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Genomic context

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Sequence:
NC_000913.3 (3752963..3754099, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene outer membrane protein YiaT Neighboring gene putative DNA-binding transcriptional regulator YiaU Neighboring gene DUF3302 domain-containing protein YiaW Neighboring gene aldehyde dehydrogenase B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transposon mutagenesis identifies genes which control antimicrobial drug tolerance in stationary-phase Escherichia coli. Hu Y, et al. FEMS Microbiol Lett, 2005 Feb 1. PMID 15668009
  2. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
  3. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article
  4. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
  5. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

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Preferred Names
putative membrane fusion protein YiaV

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3752963..3754099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418043.1 putative membrane fusion protein YiaV [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418043.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376FUI4
    Conserved Domains (1) summary
    COG1566
    Location:5 → 356
    EmrA; Multidrug resistance efflux pump [Defense mechanisms]
Nucleotide Protein
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