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yhhX putative oxidoreductase YhhX [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947944, updated on 17-Dec-2024

Summary

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Official Symbol
yhhX
Official Full Name
putative oxidoreductase YhhX
Primary source
ECOCYC:G7757
Locus tag
b3440
See related
ASAP:ABE-0011232
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3425
Summary
AFMB Structural Genomics target Number 65 (http://afmb.cnrs-mrs.fr/article171.html). [More information is available at EcoGene: EG12944]. Based on sequence similarity, YhhX is predicted to be a D-galactose 1-dehydrogenase . [More information is available at EcoCyc: G7757].
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Genomic context

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Sequence:
NC_000913.3 (3579768..3580805, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional repressor GntR Neighboring gene quercetin 2,3-dioxygenase Neighboring gene ncRNA Neighboring gene N-acetyltransferase YhhY

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of FUR regulons in gamma-proteobacteria. Panina EM, et al. Nucleic Acids Res, 2001 Dec 15. PMID 11812853, Free PMC Article
  2. A method for direct cloning of fur-regulated genes: identification of seven new fur-regulated loci in Escherichia coli. Vassinova N, et al. Microbiology (Reading), 2000 Dec. PMID 11101675
  3. Identifying Escherichia coli genes involved in intrinsic multidrug resistance. Duo M, et al. Appl Microbiol Biotechnol, 2008 Dec. PMID 18807027
  4. An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR). Reed JL, et al. Genome Biol, 2003. PMID 12952533, Free PMC Article
  5. Enrichment of low abundance proteins of Escherichia coli by hydroxyapatite chromatography. Fountoulakis M, et al. Electrophoresis, 1999 Aug. PMID 10493123

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
enables scyllo-inositol dehydrogenase (NADP+) activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in antibiotic biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
putative oxidoreductase YhhX

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3579768..3580805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417897.1 putative oxidoreductase YhhX [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417897.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2X1NAJ6
    Conserved Domains (1) summary
    PRK10206
    Location:2 → 345
    PRK10206; putative oxidoreductase; Provisional
Nucleotide Protein
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