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ygfB PF03695 family protein YgfB [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947400, updated on 17-Dec-2024

Summary

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Official Symbol
ygfB
Official Full Name
PF03695 family protein YgfB
Primary source
ECOCYC:EG11323
Locus tag
b2909
See related
ASAP:ABE-0009551
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2904
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Genomic context

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Sequence:
NC_000913.3 (3054866..3055444, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 2-octaprenylphenol 6-hydroxylase Neighboring gene 2-octaprenyl-6-methoxyphenol 4-hydroxylase Neighboring gene Xaa-Pro aminopeptidase Neighboring gene cell division protein ZapA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Isolation and characterization of a light-sensitive mutant of Escherichia coli K-12 with a mutation in a gene that is required for the biosynthesis of ubiquinone. Nakahigashi K, et al. J Bacteriol, 1992 Nov. PMID 1339425, Free PMC Article
  2. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
  3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
PF03695 family protein YgfB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3054866..3055444 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417385.4 PF03695 family protein YgfB [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417385.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0H2Z276, A0A0H3F3W7, A0A140N652, A0A192CBE1, A0A1X3I2P7, A0A1X3IX41, A0A1X3JDF6, A0A454A767, A0A4P8BY93, A0A829L1L2, A0A9P2I8E2, A0AA35AM48, A0AA36P7Z7, A0AAD2NUA7, A0AAJ3NWH3, A0AAN1AI66, A0AAN3MCP4, B1LDB1, C3SVP2, D3GTS3, F4T2M8, Q1R7C1
    Conserved Domains (1) summary
    PRK01736
    Location:2 → 192
    PRK01736; hypothetical protein; Reviewed
Nucleotide Protein
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