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ygfX protein YgfX [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947379, updated on 17-Dec-2024

Summary

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Official Symbol
ygfX
Official Full Name
protein YgfX
Primary source
ECOCYC:G7509
Locus tag
b2896
See related
ASAP:ABE-0009505
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
cptA; ECK2891
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Genomic context

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Sequence:
NC_000913.3 (3040416..3040823, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene site-specific recombinase Neighboring gene flavodoxin 2 Neighboring gene FAD assembly factor Neighboring gene folate-binding protein Neighboring gene hemolysin-III family protein YqfA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A novel membrane-bound toxin for cell division, CptA (YgfX), inhibits polymerization of cytoskeleton proteins, FtsZ and MreB, in Escherichia coli. Masuda H, et al. FEMS Microbiol Lett, 2012 Mar. PMID 22239607, Free PMC Article
  2. A novel family of Escherichia coli toxin-antitoxin gene pairs. Brown JM, et al. J Bacteriol, 2003 Nov. PMID 14594833, Free PMC Article
  3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cell shape IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
protein YgfX

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3040416..3040823 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417372.1 protein YgfX [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417372.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7CIG0
    Conserved Domains (1) summary
    pfam07254
    Location:1 → 129
    Cpta_toxin; Membrane-bound toxin component of toxin-antitoxin system
Nucleotide Protein
Heading Accession and Version

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