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ydhX putative 4Fe-4S ferredoxin-like protein YdhX [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947308, updated on 3-Dec-2024

Summary

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Official Symbol
ydhX
Official Full Name
putative 4Fe-4S ferredoxin-like protein YdhX
Primary source
ECOCYC:G6899
Locus tag
b1671
See related
ASAP:ABE-0005583
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1667
Summary
Verified Tat substrate: [More information is available at EcoGene: EG13958]. YdhX is a predicted electron transfer protein . [More information is available at EcoCyc: G6899].
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Genomic context

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Sequence:
NC_000913.3 (1750345..1751013, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene FAD/NAD(P) binding domain-containing protein YdhS Neighboring gene uncharacterized protein YdhT Neighboring gene putative cytochrome YdhU Neighboring gene uncharacterized protein YdhW Neighboring gene putative oxidoreductase YdhV

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pathfinders and trailblazers: a prokaryotic targeting system for transport of folded proteins. Sargent F, et al. FEMS Microbiol Lett, 2006 Jan. PMID 16445746
  2. Protein targeting by the bacterial twin-arginine translocation (Tat) pathway. Berks BC, et al. Curr Opin Microbiol, 2005 Apr. PMID 15802249
  3. The Tat protein translocation pathway and its role in microbial physiology. Berks BC, et al. Adv Microb Physiol, 2003. PMID 14560665
  4. Oligomeric properties and signal peptide binding by Escherichia coli Tat protein transport complexes. de Leeuw E, et al. J Mol Biol, 2002 Oct 4. PMID 12367533
  5. Export of complex cofactor-containing proteins by the bacterial Tat pathway. Palmer T, et al. Trends Microbiol, 2005 Apr. PMID 15817387

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in outer membrane-bounded periplasmic space IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
putative 4Fe-4S ferredoxin-like protein YdhX

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1750345..1751013 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416186.4 putative 4Fe-4S ferredoxin-like protein YdhX [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416186.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAI9ME31
    Conserved Domains (1) summary
    TIGR03149
    Location:2 → 210
    cyt_nit_nrfC; cytochrome c nitrite reductase, Fe-S protein
Nucleotide Protein
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