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ygaC DUF2002 domain-containing protein YgaC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947156, updated on 3-Dec-2024

Summary

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Official Symbol
ygaC
Official Full Name
DUF2002 domain-containing protein YgaC
Primary source
ECOCYC:EG12201
Locus tag
b2671
See related
ASAP:ABE-0008795
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2665
Summary
Regulation has been described . [More information is available at EcoCyc: EG12201].
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Genomic context

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Sequence:
NC_000913.3 (2799650..2799994, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional repressor StpA with RNA chaperone activity Neighboring gene L-alanine exporter Neighboring gene DUF883 domain-containing protein YgaM Neighboring gene glutaredoxin-like protein NrdH Neighboring gene dimanganese-tyrosyl radical cofactor maintenance flavodoxin NrdI

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Plasmids bearing hfq and the hns-like gene stpA complement hns mutants in modulating arginine decarboxylase gene expression in Escherichia coli. Shi X, et al. J Bacteriol, 1994 Nov. PMID 7961433, Free PMC Article
  2. A method for direct cloning of fur-regulated genes: identification of seven new fur-regulated loci in Escherichia coli. Vassinova N, et al. Microbiology (Reading), 2000 Dec. PMID 11101675
  3. Rapid acid treatment of Escherichia coli: transcriptomic response and recovery. Kannan G, et al. BMC Microbiol, 2008 Feb 26. PMID 18302792, Free PMC Article
  4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
DUF2002 domain-containing protein YgaC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2799650..2799994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417157.1 DUF2002 domain-containing protein YgaC [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417157.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B9AT20
    Conserved Domains (1) summary
    PRK10556
    Location:1 → 111
    PRK10556; hypothetical protein; Provisional
Nucleotide Protein
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