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yfcA putative transporter YfcA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946808, updated on 3-Dec-2024

Summary

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Official Symbol
yfcA
Official Full Name
putative transporter YfcA
Primary source
ECOCYC:EG11144
Locus tag
b2327
See related
ASAP:ABE-0007689
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2321
Summary
YfcA is an inner membrane protein with seven predicted transmembrane domains. [More information is available at EcoCyc: EG11144].
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Genomic context

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Sequence:
NC_000913.3 (2444751..2445560, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene PF08891 family protein YfcL Neighboring gene EF-P-Lys34 hydroxylase Neighboring gene peptidoglycan DD-endopeptidase/peptidoglycan LD-endopeptidase Neighboring gene chorismate synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BIOSYNTHESIS OF SERINE IN ESCHERICHIA COLI AND SALMONELLA TYPHIMURIUM. UMBARGER HE, et al. J Bacteriol, 1963 Jun. PMID 14047241, Free PMC Article
  2. Cell-free complements in vivo expression of the E. coli membrane proteome. Savage DF, et al. Protein Sci, 2007 May. PMID 17456747, Free PMC Article
  3. Inferring gene function from evolutionary change in signatures of translation efficiency. Krisko A, et al. Genome Biol, 2014 Mar 3. PMID 24580753, Free PMC Article
  4. Cloning and characterization of mepA, the structural gene of the penicillin-insensitive murein endopeptidase from Escherichia coli. Keck W, et al. Mol Microbiol, 1990 Feb. PMID 2187143
  5. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within response to heat IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
putative transporter YfcA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2444751..2445560 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416830.1 putative transporter YfcA [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416830.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376M4V6, A0A6N3HT83, A0A7A6KCG9
    Conserved Domains (1) summary
    PRK10621
    Location:4 → 269
    PRK10621; hypothetical protein; Provisional
Nucleotide Protein
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