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slyB outer membrane lipoprotein SlyB [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946801, updated on 3-Dec-2024

Summary

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Official Symbol
slyB
Official Full Name
outer membrane lipoprotein SlyB
Primary source
ECOCYC:G6881
Locus tag
b1641
See related
ASAP:ABE-0005493
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1637
Summary
Mg(2+) stimulon. [More information is available at EcoGene: EG13409]. Expression analysis shows slyB expression is repressed in the presence of high concentrations of extracellular Mg2+. [More information is available at EcoCyc: G6881].
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Genomic context

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Sequence:
NC_000913.3 (1719876..1720343)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene inhibitor of c-type lysozyme, putative lipoprotein Neighboring gene anhydro-N-acetylmuramic acid kinase Neighboring gene DNA-binding transcriptional dual regulator SlyA Neighboring gene DUF1656 domain-containing protein YdhI

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SlyA, a regulatory protein from Salmonella typhimurium, induces a haemolytic and pore-forming protein in Escherichia coli. Ludwig A, et al. Mol Gen Genet, 1995 Dec 15. PMID 8544813
  2. Systematic analysis of native membrane protein complexes in Escherichia coli. Maddalo G, et al. J Proteome Res, 2011 Apr 1. PMID 21210718
  3. Identification and molecular characterization of the Mg2+ stimulon of Escherichia coli. Minagawa S, et al. J Bacteriol, 2003 Jul. PMID 12813061, Free PMC Article
  4. Signal transduction cascade between EvgA/EvgS and PhoP/PhoQ two-component systems of Escherichia coli. Eguchi Y, et al. J Bacteriol, 2004 May. PMID 15126461, Free PMC Article
  5. Comparison of the PhoPQ regulon in Escherichia coli and Salmonella typhimurium. Monsieurs P, et al. J Mol Evol, 2005 Apr. PMID 15883881

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
is_active_in cell outer membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cell outer membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cell outer membrane IEA
Inferred from Electronic Annotation
more info
  
located_in outer membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
outer membrane lipoprotein SlyB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1719876..1720343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_025304.1 outer membrane lipoprotein SlyB [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for YP_025304.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376S8C7
    Conserved Domains (1) summary
    COG3133
    Location:1 → 154
    SlyB; Outer membrane lipoprotein SlyB [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
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