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yfbS putative transporter YfbS [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946766, updated on 3-Dec-2024

Summary

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Official Symbol
yfbS
Official Full Name
putative transporter YfbS
Primary source
ECOCYC:G7186
Locus tag
b2292
See related
ASAP:ABE-0007565
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2286
Summary
IT (Ion Transporter) superfamily (Prakash, 2003). [More information is available at EcoGene: EG14103].
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Genomic context

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Sequence:
NC_000913.3 (2409520..2411352, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene glutamate--pyruvate aminotransferase AlaA Neighboring gene dCMP phosphohydrolase Neighboring gene hexitol phosphatase A Neighboring gene PF03887 family protein YfbU

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Domain structure and pore loops in the 2-hydroxycarboxylate transporter family. Lolkema JS. J Mol Microbiol Biotechnol, 2006. PMID 17114896
  2. Sequence and hydropathy profile analysis of two classes of secondary transporters. Lolkema JS, et al. Mol Membr Biol, 2005 May-Jun. PMID 16096261
  3. The ion transporter superfamily. Prakash S, et al. Biochim Biophys Acta, 2003 Dec 3. PMID 14643936
  4. Classification of 29 families of secondary transport proteins into a single structural class using hydropathy profile analysis. Lolkema JS, et al. J Mol Biol, 2003 Apr 11. PMID 12662917
  5. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables monoatomic cation transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in monoatomic cation transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in potassium ion transport IEA
Inferred from Electronic Annotation
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative transporter YfbS

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2409520..2411352 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416795.1 putative transporter YfbS [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416795.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3L5GY79, A0A5B9AID2
    Conserved Domains (1) summary
    COG0471
    Location:24 → 610
    CitT; Di- and tricarboxylate transporter [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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