U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

yoaF DUF333 domain-containing lipoprotein YoaF [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946310, updated on 3-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
yoaF
Official Full Name
DUF333 domain-containing lipoprotein YoaF
Primary source
ECOCYC:G6979
Locus tag
b1793
See related
ASAP:ABE-0005966
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1791
Summary
First 16 aa are a type II signal peptide. [More information is available at EcoGene: EG14304].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (1877278..1877532, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 2-nitroimidazole exporter Neighboring gene DUF488 domain-containing protein YeaO Neighboring gene diguanylate cyclase DgcP Neighboring gene putative membrane protein YoaK

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
  2. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130
  3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
DUF333 domain-containing lipoprotein YoaF

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1877278..1877532 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416307.1 DUF333 domain-containing lipoprotein YoaF [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416307.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S0FT31
    Conserved Domains (1) summary
    COG3042
    Location:1 → 82
    Hlx; Putative hemolysin [General function prediction only]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.