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pdxI pyridoxal reductase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945980, updated on 17-Dec-2024

Summary

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Official Symbol
pdxI
Official Full Name
pyridoxal reductase
Primary source
ECOCYC:EG11309
Locus tag
b1406
See related
ASAP:ABE-0004698
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1399; ydbC
Summary
ydbC belongs to the NsrR regulon . [More information is available at EcoCyc: EG11309].
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Genomic context

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Sequence:
NC_000913.3 (1474221..1475081)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene IS2 insertion element protein InsB Neighboring gene IS2 insertion element repressor InsA Neighboring gene IS30 family transposase Neighboring gene DUF2773 domain-containing protein YdbD Neighboring gene CDP-alcohol phosphatidyltransferase domain-containing protein YnbA Neighboring gene putative CDP-diglyceride synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pyridoxal Reductase, PdxI, Is Critical for Salvage of Pyridoxal in Escherichia coli. Ito T, et al. J Bacteriol, 2020 May 27. PMID 32253339, Free PMC Article
  2. Multiple IS insertion sequences near the replication terminus in Escherichia coli K-12. Moszer I, et al. Biochimie, 1991 Nov. PMID 1665988
  3. Molecular characterization of PadA, a phenylacetaldehyde dehydrogenase from Escherichia coli. Ferrandez A, et al. FEBS Lett, 1997 Apr 7. PMID 9109378
  4. The NsrR regulon of Escherichia coli K-12 includes genes encoding the hybrid cluster protein and the periplasmic, respiratory nitrite reductase. Filenko N, et al. J Bacteriol, 2007 Jun. PMID 17449618, Free PMC Article
  5. A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. Aiba H, et al. DNA Res, 1996 Dec 31. PMID 9097039

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Pyridoxal Reductase, PdxI, Is Critical for Salvage of Pyridoxal in Escherichia coli.
    Title: Pyridoxal Reductase, PdxI, Is Critical for Salvage of Pyridoxal in Escherichia coli.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables aldo-keto reductase (NADPH) activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
enables pyridoxine:NADP 4-dehydrogenase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables pyridoxine:NADP 4-dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in pyridoxal 5'-phosphate salvage IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
pyridoxal reductase
NP_415924.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1474221..1475081
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415924.1 pyridoxal reductase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415924.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A478L240
    Conserved Domains (1) summary
    PRK10376
    Location:1 → 286
    PRK10376; putative oxidoreductase; Provisional
Nucleotide Protein
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