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uspF universal stress protein F [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945948, updated on 3-Dec-2024

Summary

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Official Symbol
uspF
Official Full Name
universal stress protein F
Primary source
ECOCYC:G6699
Locus tag
b1376
See related
ASAP:ABE-0004605
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1371; UP03; ynaF; yzzL
Summary
NMR solution structure determined for Escherichia coli UspF(YnaF) (Saveanu, 2002). otherPDB (M. jannaschii): [More information is available at EcoGene: EG12674]. UspF is a nucleotide binding protein in the class II universal stress protein family . [More information is available at EcoCyc: G6699].
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Genomic context

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Sequence:
NC_000913.3 (1435185..1435619, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein YnaM Neighboring gene pseudo Neighboring gene outer membrane porin N Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Domain swapping reveals that the N-terminal domain of the sensor kinase KdpD in Escherichia coli is important for signaling. Heermann R, et al. BMC Microbiol, 2009 Jul 9. PMID 19589130, Free PMC Article
  2. Heterodimer formation within universal stress protein classes revealed by an in silico and experimental approach. Nachin L, et al. J Mol Biol, 2008 Jul 4. PMID 18514734
  3. Proteome analysis to assess physiological changes in Escherichia coli grown under glucose-limited fed-batch conditions. Raman B, et al. Biotechnol Bioeng, 2005 Nov 5. PMID 16180237
  4. Differential roles of the universal stress proteins of Escherichia coli in oxidative stress resistance, adhesion, and motility. Nachin L, et al. J Bacteriol, 2005 Sep. PMID 16159758, Free PMC Article
  5. Universal stress proteins in Escherichia coli. Siegele DA. J Bacteriol, 2005 Sep. PMID 16159755, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. N-terminus verified by Edman degradation on complete protein
    Title: Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ATP binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cell adhesion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within regulation of bacterial-type flagellum-dependent cell motility IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
universal stress protein F

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1435185..1435619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415894.4 universal stress protein F [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415894.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8T5ZQN8
    Conserved Domains (1) summary
    PRK15005
    Location:1 → 144
    PRK15005; universal stress protein UspF
Nucleotide Protein
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