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ycjX DUF463 domain-containing protein YcjX [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945872, updated on 17-Dec-2024

Summary

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Official Symbol
ycjX
Official Full Name
DUF463 domain-containing protein YcjX
Primary source
ECOCYC:G6659
Locus tag
b1321
See related
ASAP:ABE-0004433
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1317
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Genomic context

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Sequence:
NC_000913.3 (1384117..1385514)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene outer membrane porin G Neighboring gene DNA-binding transcriptional repressor YcjW Neighboring gene DUF697 domain-containing inner membrane protein YcjF Neighboring gene DNA-binding transcriptional dual regulator TyrR Neighboring gene lipid hydroperoxide peroxidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Interplay between the heat shock response and translation in Escherichia coli. Rasouly A, et al. Res Microbiol, 2009 May. PMID 19379808
  2. YbeY, a heat shock protein involved in translation in Escherichia coli. Rasouly A, et al. J Bacteriol, 2009 Apr. PMID 19181801, Free PMC Article
  3. The global transcriptional response of Escherichia coli to induced sigma 32 protein involves sigma 32 regulon activation followed by inactivation and degradation of sigma 32 in vivo. Zhao K, et al. J Biol Chem, 2005 May 6. PMID 15757896
  4. Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress. Nonaka G, et al. Genes Dev, 2006 Jul 1. PMID 16818608, Free PMC Article
  5. A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. Aiba H, et al. DNA Res, 1996 Dec 31. PMID 9097039

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
NOT enables ATP hydrolysis activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables GDP binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTP binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables GTPase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
DUF463 domain-containing protein YcjX

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1384117..1385514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415837.1 DUF463 domain-containing protein YcjX [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415837.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7TT45, W1WWQ7
    Conserved Domains (1) summary
    COG3106
    Location:1 → 465
    YcjX; Predicted ATPase, YcjX-like family [General function prediction only]
Nucleotide Protein
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