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tfaP putative tail fiber assembly protein TfaP [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945724, updated on 3-Dec-2024

Summary

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Official Symbol
tfaP
Official Full Name
putative tail fiber assembly protein TfaP
Primary source
ECOCYC:G6598
Locus tag
b1155
See related
ASAP:ABE-0003878
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1141; ymfS
Summary
tfaP is expectd to be transcriptionally silenced in the P-element P(-) orientation, although is may not be expressed and is not expected to be functional even if expressed since e14 does not produce infective virions (Plasterk, 1984; Mehta, 2005). [More information is available at EcoGene: EG14337].
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Genomic context

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Sequence:
NC_000913.3 (1208132..1208545)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene DUF2313 domain-containing protein YmfQ Neighboring gene protein StfP Neighboring gene putative tail fiber assembly protein TfaE Neighboring gene pseudo Neighboring gene site-specific DNA recombinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The invertible P-DNA segment in the chromosome of Escherichia coli. Plasterk RH, et al. EMBO J, 1985 Jan. PMID 3894006, Free PMC Article
  2. Analysis of the lambdoid prophage element e14 in the E. coli K-12 genome. Mehta P, et al. BMC Microbiol, 2004 Jan 20. PMID 14733619, Free PMC Article
  3. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
putative tail fiber assembly protein TfaP

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1208132..1208545
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415673.1 putative tail fiber assembly protein TfaP [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415673.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P09154
    Conserved Domains (1) summary
    cl17077
    Location:60 → 133
    Caudo_TAP; Caudovirales tail fibre assembly protein, lambda gpK
Nucleotide Protein
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