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ycbV putative fimbrial protein YcbV [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945562, updated on 17-Dec-2024

Summary

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Official Symbol
ycbV
Official Full Name
putative fimbrial protein YcbV
Primary source
ECOCYC:G6485
Locus tag
b0943
See related
ASAP:ABE-0003195
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0934
Summary
One of 25 FimA homologs in EcoGene. [More information is available at EcoGene: EG13714].
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Genomic context

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Sequence:
NC_000913.3 (1003439..1003954)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative fimbrial usher protein ElfC Neighboring gene putative fimbrial-like adhesin protein Neighboring gene putative fimbrial protein YcbU Neighboring gene putative fimbrial chaperone YcbF Neighboring gene dihydroorotate dehydrogenase, type 2 Neighboring gene cell division protein ZapC Neighboring gene 6-N-hydroxylaminopurine resistance protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Escherichia coli K-12 possesses multiple cryptic but functional chaperone-usher fimbriae with distinct surface specificities. Korea CG, et al. Environ Microbiol, 2010 Jul. PMID 20345943
  2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
  
involved_in cell adhesion involved in single-species biofilm formation IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within cell adhesion involved in single-species biofilm formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in pilus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in pilus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative fimbrial protein YcbV

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1003439..1003954
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415463.2 putative fimbrial protein YcbV [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415463.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2H4TNG7, A0A8S7EA63, A0A8T5ZKL4, A0AAV3I9I7
    Conserved Domains (1) summary
    COG3539
    Location:1 → 171
    FimA; Pilin (type 1 fimbria component protein) [Cell motility]
Nucleotide Protein
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Gene LinkOut

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