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yaeF peptidase C92 family protein YaeF [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 944892, updated on 3-Dec-2024

Summary

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Official Symbol
yaeF
Official Full Name
peptidase C92 family protein YaeF
Primary source
ECOCYC:EG12138
Locus tag
b0193
See related
ASAP:ABE-0000655
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0193; yaeK
Summary
First 20 aa are predicted to be a type II signal peptide. [More information is available at EcoGene: EG12138]. The protein is a member of a family of bacterial proteins (the YaeF/YiiX family) that defines one subset of the NlpC/P60 protein superfamily . [More information is available at EcoCyc: EG12138].
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Genomic context

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Sequence:
NC_000913.3 (216179..217003, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YaeQ Neighboring gene peptidyl-tRNA hydrolase, ribosome rescue factor Neighboring gene sensor lipoprotein NlpE Neighboring gene proline--tRNA ligase Neighboring gene tRNA m(6)t(6)A37 methyltransferase Neighboring gene sensor lipoprotein RcsF

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and sequence of the drpA gene from Escherichia coli. Zhou Z, et al. J Bacteriol, 1990 Jan. PMID 1688424, Free PMC Article
  2. Overproduction of NlpE, a new outer membrane lipoprotein, suppresses the toxicity of periplasmic LacZ by activation of the Cpx signal transduction pathway. Snyder WB, et al. J Bacteriol, 1995 Aug. PMID 7635808, Free PMC Article
  3. Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs. Eriani G, et al. Nature, 1990 Sep 13. PMID 2203971
  4. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
  5. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables cysteine-type peptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
peptidase C92 family protein YaeF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    216179..217003 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414735.4 peptidase C92 family protein YaeF [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414735.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAN3H046
    Conserved Domains (1) summary
    PRK11479
    Location:1 → 274
    PRK11479; YaeF family permuted papain-like enzyme
Nucleotide Protein
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