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Cnnm4 cyclin M4 [ Mus musculus (house mouse) ]

Gene ID: 94220, updated on 4-Jan-2025

Summary

Official Symbol
Cnnm4provided by MGI
Official Full Name
cyclin M4provided by MGI
Primary source
MGI:MGI:2151060
See related
Ensembl:ENSMUSG00000037408 AllianceGenome:MGI:2151060
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Acdp4; 5430430O18Rik
Summary
Enables magnesium ion transmembrane transporter activity and sodium ion transmembrane transporter activity. Acts upstream of or within enamel mineralization; magnesium ion homeostasis; and magnesium ion transport. Located in basolateral plasma membrane. Is expressed in colon and metanephros. Human ortholog(s) of this gene implicated in Jalili syndrome. Orthologous to human CNNM4 (cyclin and CBS domain divalent metal cation transport mediator 4). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in colon adult (RPKM 97.1), large intestine adult (RPKM 49.6) and 6 other tissues See more
Orthologs
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Genomic context

See Cnnm4 in Genome Data Viewer
Location:
1 B; 1 15.28 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (36510678..36547857)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (36471597..36508776)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene fer-1 like family member 5 Neighboring gene lectin, mannose-binding 2-like Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:36501343-36501452 Neighboring gene STARR-positive B cell enhancer ABC_E5746 Neighboring gene predicted gene, 33401 Neighboring gene predicted gene, 33454 Neighboring gene STARR-positive B cell enhancer mm9_chr1:36568490-36568791 Neighboring gene cyclin M3 Neighboring gene ankyrin repeat domain 23 Neighboring gene ankyrin repeat domain 39

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (4)  1 citation

General gene information

Markers

Gene Ontology Provided by MGI

Process Evidence Code Pubs
acts_upstream_of_or_within enamel mineralization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in intracellular monoatomic cation homeostasis IEA
Inferred from Electronic Annotation
more info
 
involved_in intracellular monoatomic cation homeostasis ISO
Inferred from Sequence Orthology
more info
 
involved_in magnesium ion homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within magnesium ion homeostasis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in magnesium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in magnesium ion transport IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within magnesium ion transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in visual perception IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in basolateral plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in dendrite ISO
Inferred from Sequence Orthology
more info
 
located_in neuronal cell body ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of protein-containing complex IEA
Inferred from Electronic Annotation
more info
 
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
metal transporter CNNM4
Names
ancient conserved domain protein 4
ancient conserved domain-containing protein 4
mACDP4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_033570.2NP_291048.2  metal transporter CNNM4 precursor

    See identical proteins and their annotated locations for NP_291048.2

    Status: VALIDATED

    Source sequence(s)
    AK164200, AK173209, CJ168962
    Consensus CDS
    CCDS14879.2
    UniProtKB/Swiss-Prot
    Q69ZF7, Q9JIM7
    UniProtKB/TrEMBL
    D3Y2F8
    Related
    ENSMUSP00000121317.2, ENSMUST00000153128.2
    Conserved Domains (3) summary
    COG0517
    Location:370497
    CBS; CBS domain [Signal transduction mechanisms]
    cd04590
    Location:379499
    CBS_pair_CorC_HlyC_assoc; This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the CorC_HlyC domain. CorC_HlyC is a transporter associated domain. This small domain is found in Na+/H+ antiporters, in proteins involved in ...
    pfam01595
    Location:193355
    DUF21; Domain of unknown function DUF21

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    36510678..36547857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)