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rpoZ DNA-directed RNA polymerase subunit omega [ Pseudomonas yamanorum ]

Gene ID: 93513997, updated on 12-Dec-2024

Summary

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Gene symbol
rpoZ
Gene description
DNA-directed RNA polymerase subunit omega
Locus tag
BLU46_RS16990
Gene type
protein coding
Organism
Pseudomonas yamanorum (strain: LMG 27247, type-material: type strain of Pseudomonas yamanorum)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
SAMN05216237_3499
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Genomic context

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Location:
chromosome: I

I - NZ_LT629793.1Genomic Context describing neighboring genes Neighboring gene RidA family protein Neighboring gene bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase Neighboring gene guanylate kinase Neighboring gene YicC/YloC family endoribonuclease

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_LT629793.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Escherichia coli RNA polymerase subunit omega and its N-terminal domain bind full-length beta' to facilitate incorporation into the alpha2beta subassembly. Ghosh P, et al. Eur J Biochem, 2001 Sep. PMID 11531998
  2. The omega subunit of Escherichia coli K-12 RNA polymerase is not required for stringent RNA control in vivo. Gentry D, et al. J Bacteriol, 1991 Jun. PMID 1711031, Free PMC Article
  3. Complete Genome Sequence of Pseudomonas fluorescens LBUM636, a Strain with Biocontrol Capabilities against Late Blight of Potato. Morrison CK, et al. Genome Announc, 2016 May 26. PMID 27231373, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
DNA-directed RNA polymerase subunit omega
WP_003176920.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_LT629793.1 Reference assembly

    Range
    3628130..3628393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003176920.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Pseudomonas]

    See identical proteins and their annotated locations for WP_003176920.1

    UniProtKB/Swiss-Prot
    C3K482
    UniProtKB/TrEMBL
    A0A075PAB9, A0A0A1Z762, A0A0H5ABH5, A0A0Q4E5J1, A0A0R3A8E0, A0A0R3BE31, A0A0W0HNP6, A0A127HTX8, A0A172Z9L1, A0A1B5DW21, A0A1D3K6H5, A0A1E4XM03, A0A1H0IM37, A0A1H0SPQ4, A0A1H2GXB4, A0A1H2NVG3, A0A1H3QA05, A0A1H4KNC2, A0A1N7UU01, A0A1R0GK70, A0A1S2UZL5, A0A1V2KA88, A0A1X7EL38, A0A223VKD9, A0A246G6A7, A0A255XH83, A0A257DVN6, A0A263P050, A0A2G0W5Z6, A0A2G0WMT0, A0A2G5LP40, A0A2H2YZP8, A0A2K9CGE2, A0A2M9GDY9, A0A2N5F0Z6, A0A2N7YDC4, A0A2N7YMN2, A0A2N7Z986, A0A2P8LLC3, A0A2T4FTU5, A0A3G7YJ10, A0A3G8CDT2, A0A423FC62, A0A4U3IPA1, A0A4Z0ATY9, A0A5C5P1E3, A0A5C5Q5N4, A0A5D3G7J9, A0A5N7JNQ9, A0A5P1DCF2, A0A5R8R1J5, A0A6I3WA49, A0A7S7MU72, A0A7X1ANC7, A0A7X2UWN1, A0A7X9TSB3, A0A7Y0Z3N8, A0A7Y7ZSC8, A0A7Y8AEQ7, A0A7Y8CVH7, A0A7Y8DCC6, A0A7Y8DNA5, A0A7Y8JVH9, A0A7Y8RM78, A0A855K7U4, A0A855QSY8, A0A8H9YXU3, A0A9X1C772, A0AA35I538, A0AA89XDP7, A0AAJ3GRL7, A0AAJ4E6Z4, A0AAP6YJU2, A0AAP9D427, A0AAX3R9A0, U1T9W0, W2DRH0
Nucleotide Protein
Heading Accession and Version