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def peptide deformylase [ Pseudomonas paracarnis ]

Gene ID: 93433595, updated on 13-Dec-2024

Summary

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Gene symbol
def
Gene description
peptide deformylase
Locus tag
JMV15_RS23125
Gene type
protein coding
Organism
Pseudomonas paracarnis (strain: V5/DAB/2/5, type-material: type strain of Pseudomonas paracarnis)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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NZ_CAJFCN0100000.1Genomic Context describing neighboring genes Neighboring gene DNA-processing protein DprA Neighboring gene hypothetical protein Neighboring gene methionyl-tRNA formyltransferase Neighboring gene 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB Neighboring gene Trk system potassium transporter TrkA

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CAJFCN010000013.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure-function relationships within the peptide deformylase family. Evidence for a conserved architecture of the active site involving three conserved motifs and a metal ion. Meinnel T, et al. J Mol Biol, 1997 Apr 4. PMID 9126850

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
peptide deformylase
WP_003187273.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CAJFCN010000013.1 Reference assembly

    Range
    98696..99202
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003187273.1 MULTISPECIES: peptide deformylase [Pseudomonas]

    See identical proteins and their annotated locations for WP_003187273.1

    UniProtKB/TrEMBL
    A0A0W0N313, A0A1Q5WWJ2, A0A219A902, A0A2H2YYY7, A0A3M5V4C4, A0AAJ3MTY1, A0AAJ6HCB9, A0AAU0SHN1, I4K745