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LOC9325329 probable folate-biopterin transporter 3 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9325329, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9325329
Gene description
probable folate-biopterin transporter 3
Locus tag
ARALYDRAFT_477147
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9325329 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302554.1 (18807765..18810382)

NW_003302554.1Genomic Context describing neighboring genes Neighboring gene wall-associated receptor kinase-like 10 Neighboring gene nudix hydrolase 3 Neighboring gene AP2-like ethylene-responsive transcription factor At1g79700 Neighboring gene aspartyl protease family protein At5g10770 Neighboring gene lysophospholipid acyltransferase LPEAT1 Neighboring gene protein HEADING DATE REPRESSOR 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302554 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable folate-biopterin transporter 3
Names
integral membrane transporter family protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302554.1 Reference v.1.0 Primary Assembly

    Range
    18807765..18810382
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002887755.2 → XP_002887801.1  probable folate-biopterin transporter 3 isoform X1

    See identical proteins and their annotated locations for XP_002887801.1

    UniProtKB/TrEMBL
    D7KWL5
    Conserved Domains (2) summary
    pfam03092
    Location:61 → 473
    BT1; BT1 family
    cl21472
    Location:66 → 460
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...

  2. XM_021033964.1 → XP_020889623.1  probable folate-biopterin transporter 3 isoform X2

    Conserved Domains (1) summary
    pfam03092
    Location:61 → 397
    BT1; BT1 family

RNA

  1. XR_002333730.1 RNA Sequence

  2. XR_002333728.1 RNA Sequence

  3. XR_002333729.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Research Materials