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LOC9321571 probable prefoldin subunit 2 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9321571, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9321571
Gene description
probable prefoldin subunit 2
Locus tag
ARALYDRAFT_479767
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9321571 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302553.1 (10058913..10060812)

NW_003302553.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9319435 Neighboring gene putative inactive cysteine synthase 2 Neighboring gene pentatricopeptide repeat-containing protein At3g22470, mitochondrial Neighboring gene late embryogenesis abundant protein 31 Neighboring gene late embryogenesis abundant protein 32

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302553 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of prefoldin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable prefoldin subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302553.1 Reference v.1.0 Primary Assembly

    Range
    10058913..10060812
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002883324.2 → XP_002883370.1  probable prefoldin subunit 2

    See identical proteins and their annotated locations for XP_002883370.1

    UniProtKB/TrEMBL
    D7L1Q5
    Conserved Domains (1) summary
    pfam01920
    Location:17 → 119
    Prefoldin_2; Prefoldin subunit
Nucleotide Protein
Heading Accession and Version

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