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LOC9316807 protein REVERSION-TO-ETHYLENE SENSITIVITY1 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9316807, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9316807
Gene description
protein REVERSION-TO-ETHYLENE SENSITIVITY1
Locus tag
ARALYDRAFT_481464
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
RTE1
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Genomic context

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See LOC9316807 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302552.1 (5634300..5635856, complement)

NW_003302552.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110229087 Neighboring gene putative nuclease HARBI1 Neighboring gene glycine dehydrogenase (decarboxylating) 2, mitochondrial Neighboring gene transfer RNA leucine (anticodon AAG)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302552 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of ethylene-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to ethylene IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein REVERSION-TO-ETHYLENE SENSITIVITY1
Names
reversion-to-ethylene sensitivity1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302552.1 Reference v.1.0 Primary Assembly

    Range
    5634300..5635856 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002880694.2 → XP_002880740.1  protein REVERSION-TO-ETHYLENE SENSITIVITY1

    See identical proteins and their annotated locations for XP_002880740.1

    UniProtKB/TrEMBL
    D7LC47
    Conserved Domains (1) summary
    pfam05608
    Location:58 → 193
    DUF778; Protein of unknown function (DUF778)
Nucleotide Protein
Heading Accession and Version

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