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LOC9310460 early endosome antigen 1 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9310460, updated on 3-Jun-2019

Summary

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Gene symbol
LOC9310460
Gene description
early endosome antigen 1
Locus tag
ARALYDRAFT_662652
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9310460 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302550.1 (13153185..13157907, complement)

NW_003302550.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9310458 Neighboring gene uncharacterized LOC110227351 Neighboring gene FRIGIDA-like protein 5 Neighboring gene protein ABC transporter 1, mitochondrial Neighboring gene putative polyketide hydroxylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302550 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
early endosome antigen 1
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302550.1 Reference v.1.0 Primary Assembly

    Range
    13153185..13157907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002874347.2 → XP_002874393.1  early endosome antigen 1

    See identical proteins and their annotated locations for XP_002874393.1

    UniProtKB/TrEMBL
    D7M675
    Conserved Domains (4) summary
    COG1340
    Location:290 → 614
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam07889
    Location:300 → 378
    DUF1664; Protein of unknown function (DUF1664)
    pfam07899
    Location:835 → 1097
    Frigida; Frigida-like protein
    cl19219
    Location:501 → 627
    DUF342; Protein of unknown function (DUF342)
Nucleotide Protein
Heading Accession and Version

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